Index

A

AABB_intersects() (bfdtd.GeometryObjects.GeometryObject method) adaptXYMinMax() (GWL.woodpile.Woodpile method) add_arguments() (bfdtd.BFDTDobject.BFDTDobject method) (GWL.GWL_parser.GWLobject method) (GWL.SpiralPhasePlate.SpiralPhasePlate method) (crystals.RCD_CubicLattice.RCD_CubicLattice method) (crystals.RCD_CubicLattice.RCD_GWL_Cylinder method) (crystals.RCD_CubicLattice.RCD_GWL_Parallelepiped method) addBlockCentroSize() (GWL.GWL_parser.GWLobject method) addBlockLowerUpper() (GWL.GWL_parser.GWLobject method) addBoxFrequencySnapshots() (bfdtd.BFDTDobject.BFDTDobject method) addCentralXYZSnapshots() (bfdtd.BFDTDobject.BFDTDobject method) (in module bin.bfdtd_tool) addChild() (meshing.meshing.MultiMesh1D method) addDefaultExcitation() (bfdtd.BFDTDobject.BFDTDobject method) addDoubleQuotesIfMissing() (in module utilities.common) addEpsilonBox() (bfdtd.BFDTDobject.BFDTDobject method) addEpsilonSnapshot() (bfdtd.BFDTDobject.BFDTDobject method) addEpsilonSnapshots() (in module bin.bfdtd_tool) addExtension() (in module utilities.common) addFlatLine() (GWL.GWL_parser.GWLobject method) addFrequencySnapshot() (bfdtd.BFDTDobject.BFDTDobject method) addGWLobject() (GWL.GWL_parser.GWLobject method) addHorizontalCircle() (GWL.GWL_parser.GWLobject method) addHorizontalDisk() (GWL.GWL_parser.GWLobject method) addHorizontalGrating() (GWL.GWL_parser.GWLobject method) addLimits_X() (bfdtd.meshobject.MeshingParameters method) addLimits_Y() (bfdtd.meshobject.MeshingParameters method) addLimits_Z() (bfdtd.meshobject.MeshingParameters method) addLine() (GWL.GWL_parser.GWLobject method) addLineCylinder() (GWL.GWL_parser.GWLobject method) addModeFilteredProbe() (bfdtd.BFDTDobject.BFDTDobject method) addModeVolumeFrequencySnapshots() (in module bin.bfdtd_tool)

addParallelepiped() (crystals.RCD_CubicLattice.RCD_GWL_Parallelepiped method) addPowerCompensation() (GWL.GWL_parser.GWLobject method) addSnapshot() (bfdtd.BFDTDobject.BFDTDobject method) addSphere() (GWL.GWL_parser.GWLobject method) addTimeSnapshot() (bfdtd.BFDTDobject.BFDTDobject method) addTube() (crystals.RCD_CubicLattice.RCD_GWL_Cylinder method) (GWL.tube.Tube method) addTubeWithVerticalLines() (GWL.GWL_parser.GWLobject method) addVoxel() (GWL.GWL_parser.GWLobject method) addXblock() (GWL.GWL_parser.GWLobject method) addYblock() (GWL.GWL_parser.GWLobject method) addZblock() (GWL.GWL_parser.GWLobject method) addZGrating() (GWL.GWL_parser.GWLobject method) allowResolutionScaling (meshing.meshing.Mesh1D attribute) alphaID_to_numID() (in module utilities.brisFDTD_ID_info) Angle() (in module utilities.common) appendExcitation() (bfdtd.BFDTDobject.BFDTDobject method) appendGeometryObject() (bfdtd.BFDTDobject.BFDTDobject method) appendProbe() (bfdtd.BFDTDobject.BFDTDobject method) appendSnapshot() (bfdtd.BFDTDobject.BFDTDobject method) appendVoxels() (GWL.GWL_parser.GWLobject method) apply_transform() (in module bfdtd.RCD) applyOffset() (GWL.GWL_parser.GWLobject method) applyTransformation() (in module utilities.TransformationMatrix) applyTransformationMatrix() (bfdtd.BFDTDobject.BFDTDobject method) (GWL.GWL_parser.GWLobject method) ArgparseGUI (class in third_party.geniegui) arguments() (third_party.geniegui.ArgparseGUI method) autoMeshGeometry() (bfdtd.BFDTDobject.BFDTDobject method) autoMeshGeometryWithMaxNumberOfCells() (bfdtd.BFDTDobject.BFDTDobject method) automeshWithMaxCells() (in module bin.bfdtd_tool) automeshWithMeshingFactor() (in module bin.bfdtd_tool) autosetExcitationStartTime() (bfdtd.BFDTDobject.BFDTDobject method) autosetFrequencySnapshotSettings() (bfdtd.BFDTDobject.BFDTDobject method)

B

batch_harminv() (in module bin.harminv_wrapper) bfdtd (module) bfdtd.bfdtd_parser (module) bfdtd.BFDTDobject (module) bfdtd.bristolFDTD_generator_functions (module) bfdtd.ellipsoid (module) bfdtd.excitation (module) bfdtd.excitation_utilities (module) bfdtd.excitationTemplate (module) bfdtd.GeometryObjects (module) bfdtd.meshobject (module) bfdtd.RCD (module) bfdtd.RCD_waveguides (module) bfdtd.snapshot (module), [1] bfdtd.SpecialTriangularPrism (module) bfdtd.triangular_prism (module) BFDTDobject (class in bfdtd.BFDTDobject) bin (module) bin.addPowerCompensation (module) bin.BFDTD_fix_filenames (module) bin.bfdtd_rename (module) bin.bfdtd_tool (module)

bin.bfdtd_tool_gui (module) bin.comparePeaks (module) bin.copyBFDTD (module) bin.efficiency_run (module) bin.harminv_wrapper (module) bin.ncpus (module) bin.plotAll (module) bin.processTime (module) bin.qstat (module) bin.rerun_with_new_excitation (module) bin.resonance_run (module) bin.tdtreat (module) bin.tiddly2confluence (module) Block (class in bfdtd.GeometryObjects) block_example() (in module GWL.tilted_grating) block_example_2() (in module GWL.tilted_grating) BMEdgeSeq (class in GWL.bmesh) BMesh (class in GWL.bmesh) BMFaceSeq (class in GWL.bmesh) BMVert (class in GWL.bmesh) BMVertSeq (class in GWL.bmesh) Boundaries (class in bfdtd.BFDTDobject) Box (class in bfdtd.BFDTDobject)

C

calculateMeshingParameters() (bfdtd.BFDTDobject.BFDTDobject method) calculateModeVolume() (in module bin.bfdtd_tool) calculateNvoxelsAndInterVoxelDistance() (in module GWL.GWL_parser) center_vec3 (GWL.parallelepiped.Parallelepiped attribute) check() (bfdtd.excitation.Excitation method) check_call_and_log() (in module utilities.common) checkMesh() (in module meshing.meshing) checkPeriodvsTimeConstant() (bfdtd.excitation.Excitation method) checkSimulation() (bfdtd.BFDTDobject.BFDTDobject method) checkSnapshotNumber() (in module utilities.common) chirality (bfdtd.RCD_waveguides.RCD_HexagonalLattice_ChiralWaveguide attribute) clear() (GWL.GWL_parser.GWLobject method) clearAllSnapshots() (bfdtd.BFDTDobject.BFDTDobject method) (in module bin.bfdtd_tool) clearEpsilonSnapshots() (bfdtd.BFDTDobject.BFDTDobject method) clearExcitationList() (bfdtd.BFDTDobject.BFDTDobject method) clearFileList() (bfdtd.BFDTDobject.BFDTDobject method) clearFrequencySnapshots() (bfdtd.BFDTDobject.BFDTDobject method) clearGeoList() (bfdtd.RCD.RCD_HexagonalLattice method) clearGeometry() (bfdtd.BFDTDobject.BFDTDobject method) clearMesh() (bfdtd.BFDTDobject.BFDTDobject method) clearModeFilteredProbes() (bfdtd.BFDTDobject.BFDTDobject method) clearOutputs() (in module bin.bfdtd_tool) clearProbes() (bfdtd.BFDTDobject.BFDTDobject method) clearTimeSnapshots() (bfdtd.BFDTDobject.BFDTDobject method) commonHeader() (in module GWL.woodpile_grid) comparePeaks() (in module bin.comparePeaks) (in module bin.harminv_wrapper) computeOutline() (GWL.parallelepiped.Parallelepiped method) computePoints() (crystals.RCD_CubicLattice.RCD_GWL_Cylinder method) (GWL.SpiralPhasePlate.SpiralPhasePlate method) (GWL.SpiralSphere.SpiralSphere method) (GWL.parallelepiped.Parallelepiped method) (GWL.tilted_grating.TiltedGrating method) (GWL.tube.HalfTubeLargeWithInnerAndOuter method) (GWL.tube.HorizontalCircleTubeWithConstantAngularStep method) (GWL.tube.TruncatedTube method) (GWL.tube.Tube method) (GWL.tube.TubeLarge method) (GWL.tube.TubePapa method) (crystals.RCD_CubicLattice.RCD_GWL_Parallelepiped method)

computeVectors() (GWL.parallelepiped.Parallelepiped method) Cone (class in bfdtd.GeometryObjects) connected (GWL.parallelepiped.Parallelepiped attribute) constants (module) constants.physcon (module) coordinates (meshing.meshing.HeterogeneousMesh1D attribute) create_final_buttons() (third_party.geniegui.ArgparseGUI method) create_gui() (third_party.geniegui.ArgparseGUI method) createBlenderObject() (bfdtd.GeometryObjects.Cylinder method) (bfdtd.RCD.RCD_HexagonalLattice method) createElevatedBoxWithSubstrate() (in module GWL.box) createFromThicknessList() (meshing.meshing.HeterogeneousMesh1D method) createGeoList() (bfdtd.RCD.RCD_HexagonalLattice method) (bfdtd.RCD_waveguides.RCD_HexagonalLattice_ChiralWaveguide method) createGUI() (in module utilities.createGUI) createIceCrystal_BFDTD() (in module crystals.RCD_CubicLattice) createIceCrystal_GWL_singleLine_UnitcellByUnitcell() (in module crystals.RCD_CubicLattice) createIceCrystal_GWL_TopDown() (in module crystals.RCD_CubicLattice) createIceCrystal_GWL_TopDownFlatLines() (in module crystals.RCD_CubicLattice) createIceCrystal_GWL_WithCylinders() (in module crystals.RCD_CubicLattice) createLegs() (in module GWL.box) createMainFile() (in module GWL.woodpile_grid) createMainFile2() (in module GWL.woodpile_grid) createMasterFile() (in module GWL.woodpile_grid) createRCD() (crystals.RCD_CubicLattice.RCD_CubicLattice method) createRectangularArray() (bfdtd.RCD.RCD_HexagonalLattice method) createRectangularArraySymmetrical() (bfdtd.RCD.RCD_HexagonalLattice method) createSimpleBox() (in module GWL.box) createSingleMainFile() (in module GWL.woodpile_grid) createSubFiles() (in module GWL.woodpile_grid) createSubFiles2() (in module GWL.woodpile_grid) createSubFiles3() (in module GWL.woodpile_grid) createSubstrate() (in module GWL.box) createWoodpile() (in module special_ops.woodpile_generator_Xu_rotated_around_Z) crystals (module) crystals.RCD_CubicLattice (module) Cylinder (class in bfdtd.GeometryObjects)

D

data_epsilon (bfdtd.bfdtd_parser.FDTDdataObject attribute) data_frequency_snapshots (bfdtd.bfdtd_parser.FDTDdataObject attribute) data_time_snapshots (bfdtd.bfdtd_parser.FDTDdataObject attribute) delchars() (in module utilities.dumpObj) descr() (in module constants.physcon) difft() (in module utilities.common) difft_string() (in module utilities.common)

disableAutoFix() (bfdtd.BFDTDobject.BFDTDobject method) (bfdtd.excitation.Excitation method) disableSafetyChecks() (bfdtd.BFDTDobject.BFDTDobject method) (bfdtd.excitation.Excitation method) Distorted (class in bfdtd.GeometryObjects) do_something() (in module bin.bfdtd_tool) dumpObj() (in module utilities.dumpObj) DwellTime (GWL.GWL_parser.GWLobject attribute)

E

e1_vec3 (GWL.parallelepiped.Parallelepiped attribute) e2_vec3 (GWL.parallelepiped.Parallelepiped attribute) e3_vec3 (GWL.parallelepiped.Parallelepiped attribute) Ellipsoid (class in bfdtd.ellipsoid) (class in bfdtd.GeometryObjects) elliptifyPillar() (in module special_ops.elliptify) enableAutoFix() (bfdtd.BFDTDobject.BFDTDobject method) (bfdtd.excitation.Excitation method) enableSafetyChecks() (bfdtd.BFDTDobject.BFDTDobject method) (bfdtd.excitation.Excitation method) EnergySnapshot (class in bfdtd.snapshot) eng_string() (in module utilities.common)

Entry (class in bfdtd.BFDTDobject) EpsilonBox (class in bfdtd.snapshot) EpsilonBoxFull (class in bfdtd.snapshot) EpsilonSnapshot (class in bfdtd.snapshot) Excitation (class in bfdtd.excitation) ExcitationGaussian1 (class in bfdtd.excitationTemplate) ExcitationGaussian2 (class in bfdtd.excitationTemplate) ExcitationUniform (class in bfdtd.excitationTemplate) ExcitationWithGaussianTemplate (class in bfdtd.excitation) ExcitationWithUniformTemplate (class in bfdtd.excitation) ExcitationWrapper() (in module bfdtd.excitation_utilities) extendVoxels() (GWL.GWL_parser.GWLobject method)

F

FCC_BZ_dictionary() (in module bfdtd.RCD) FDTDdataObject (class in bfdtd.bfdtd_parser) FIB (module) FIB.FIB (module) FIB.streamFileTest (module) FIBdistanceHorizontal() (in module FIB.FIB) FIBdistanceVertical() (in module FIB.FIB) fillBox() (bfdtd.RCD.RCD_HexagonalLattice method) fillData() (bfdtd.snapshot.FrequencySnapshot method) (bfdtd.snapshot.TimeSnapshot method) findNearest() (in module utilities.common) findNearestInSortedArray() (in module utilities.common) fitBox() (bfdtd.BFDTDobject.BFDTDobject method) fix() (bfdtd.excitation.Excitation method) fixLowerUpper() (in module utilities.common)

fixSimulation() (bfdtd.BFDTDobject.BFDTDobject method) fixSnapshots() (in module bin.bfdtd_tool) Flag (class in bfdtd.BFDTDobject) float_array() (in module utilities.common) flush() (third_party.geniegui.TextPipe method) Foo (class in special_ops.SO_delimages) foobarClass (class in GWL.foobar_file) FRD_HexagonalLattice (class in bfdtd.RCD) FreqToEps() (in module bin.bfdtd_tool) FrequencySnapshot (class in bfdtd.snapshot) FrequencySnapshotID_List() (utilities.brisFDTD_ID_info.Test_brisFDTD_ID_info_Functions method) FrequencySnapshotID_ViceVersa() (utilities.brisFDTD_ID_info.Test_brisFDTD_ID_info_Functions method) func1() (in module rotationTest) func2() (in module rotationTest) functions (module) functions.get_neff (module)

G

genvarname() (in module utilities.prnutils) GEOcommand() (in module bfdtd.bristolFDTD_generator_functions) GEOin() (in module bfdtd.bristolFDTD_generator_functions) GeometryObject (class in bfdtd.GeometryObjects) GEOshellscript() (in module bfdtd.bristolFDTD_generator_functions) GEOshellscript_advanced() (in module bfdtd.bristolFDTD_generator_functions) get_argument_parser() (crystals.RCD_CubicLattice.RCD_GWL_Cylinder method) (GWL.GWL_parser.GWLobject method) (GWL.SpiralPhasePlate.SpiralPhasePlate method) (crystals.RCD_CubicLattice.RCD_GWL_Parallelepiped method) (in module bin.BFDTD_fix_filenames) (in module bin.bfdtd_rename) (in module bin.bfdtd_tool) (in module third_party.geniegui) get_c0() (in module constants.physcon) get_e() (in module constants.physcon) get_epsilon0() (in module constants.physcon) get_eV() (in module constants.physcon) get_h() (in module constants.physcon) get_h_eVs() (in module constants.physcon) get_hb() (in module constants.physcon) get_me() (in module constants.physcon) get_mu0() (in module constants.physcon) get_neff() (in module functions.get_neff) getAABB() (bfdtd.GeometryObjects.Block method) (bfdtd.GeometryObjects.Cylinder method) getAdaptedTimeOffset() (bfdtd.excitation.Excitation method) getAllTimeSnapshots() (bfdtd.BFDTDobject.BFDTDobject method) getAmplitude() (bfdtd.excitation.Excitation method) getAxes() (bfdtd.GeometryObjects.Parallelepiped method) getAxis() (bfdtd.GeometryObjects.Cylinder method) getBaseSnapshot() (bfdtd.snapshot.SnapshotBox method) getBoundaries() (bfdtd.BFDTDobject.BFDTDobject method) getBoundingBoxCentre() (bfdtd.SpecialTriangularPrism.SpecialTriangularPrism method) getBounds() (meshing.meshing.Mesh1D method) getBox() (bfdtd.BFDTDobject.BFDTDobject method) getCenter() (bfdtd.triangular_prism.TriangularPrism method) getCentro() (bfdtd.BFDTDobject.BFDTDobject method) (bfdtd.BFDTDobject.Box method) (bfdtd.GeometryObjects.Block method) (bfdtd.GeometryObjects.Cylinder method) (bfdtd.GeometryObjects.MeshBox method) (bfdtd.excitation.Excitation method) (bfdtd.snapshot.Snapshot method) getCentroOfMassAbsolute() (bfdtd.GeometryObjects.Distorted method) getCubicUnitCell() (bfdtd.RCD.RCD_HexagonalLattice method) getDefaultRefractiveIndex() (bfdtd.BFDTDobject.BFDTDobject method) getDefaultRelativeConductivity() (bfdtd.BFDTDobject.BFDTDobject method) getDefaultRelativePermittivity() (bfdtd.BFDTDobject.BFDTDobject method) getDiametre() (GWL.SpiralSphere.SpiralSphere method) getDimensions() (in module utilities.prnutils) getEfield() (bfdtd.snapshot.Snapshot method) getEndTime() (bfdtd.excitation.Excitation method) getEnergySnapshots() (bfdtd.snapshot.ModeVolumeBoxFull method) getEpsilon() (bfdtd.snapshot.TimeSnapshot method) getEpsilonSnapshots() (bfdtd.BFDTDobject.BFDTDobject method) getExcitationEndTimeMax() (bfdtd.BFDTDobject.BFDTDobject method) getExcitationFrequencyMax() (bfdtd.BFDTDobject.BFDTDobject method) getExcitationFrequencyMin() (bfdtd.BFDTDobject.BFDTDobject method) getExcitationFrequencyRange() (bfdtd.BFDTDobject.BFDTDobject method) getExcitationFrequencySet() (bfdtd.BFDTDobject.BFDTDobject method) getExcitationInfos() (bfdtd.BFDTDobject.BFDTDobject method) getExcitations() (bfdtd.BFDTDobject.BFDTDobject method) getExcitationStartTimeMin() (bfdtd.BFDTDobject.BFDTDobject method) getExcitedComponentNames() (bfdtd.excitation.Excitation method) getExecutable() (bfdtd.BFDTDobject.BFDTDobject method) getExtension() (bfdtd.BFDTDobject.BFDTDobject method) (bfdtd.BFDTDobject.Box method) (bfdtd.GeometryObjects.GeometryObject method) (bfdtd.excitation.Excitation method) (bfdtd.meshobject.MeshObject method) (bfdtd.snapshot.Snapshot method) (bfdtd.snapshot.SnapshotBox method) (in module utilities.common) getFileBaseName() (bfdtd.BFDTDobject.BFDTDobject method) getFileList() (bfdtd.BFDTDobject.BFDTDobject method) getFileNames() (bfdtd.snapshot.FrequencySnapshot method) (bfdtd.snapshot.TimeSnapshot method) getFirst() (bfdtd.snapshot.Snapshot method) getFlag() (bfdtd.BFDTDobject.BFDTDobject method) getFrequencies() (bfdtd.snapshot.FrequencySnapshot method) getFrequency() (bfdtd.excitation.Excitation method) getFrequencyMax() (bfdtd.excitation.Excitation method) getFrequencyMin() (bfdtd.excitation.Excitation method) getFrequencyRange() (bfdtd.excitation.Excitation method) getFrequencySnapshots() (bfdtd.BFDTDobject.BFDTDobject method) getGeoCentre() (bfdtd.SpecialTriangularPrism.SpecialTriangularPrism method) getGeoList() (bfdtd.RCD.RCD_HexagonalLattice method) getGeometryObjects() (bfdtd.BFDTDobject.BFDTDobject method) getGeometryObjectsByName() (bfdtd.BFDTDobject.BFDTDobject method) getGeometryObjectsByType() (bfdtd.BFDTDobject.BFDTDobject method) getGlobalCoordinates() (meshing.meshing.Mesh1D method) (meshing.meshing.MultiMesh1D method) getGlobalEnvelopPoints() (bfdtd.SpecialTriangularPrism.SpecialTriangularPrism method) getGlobalLocation() (meshing.meshing.Mesh1D method) (meshing.meshing.Mesh3D method) (meshing.meshing.MultiMesh1D method) getGlobalXCoordinates() (meshing.meshing.Mesh3D method) getGlobalYCoordinates() (meshing.meshing.Mesh3D method) getGlobalZCoordinates() (meshing.meshing.Mesh3D method) getGWLandBFDTDobjects() (GWL.woodpile.Woodpile method) getHeight() (bfdtd.GeometryObjects.Cylinder method) getHfield() (bfdtd.snapshot.Snapshot method) getIdString() (bfdtd.BFDTDobject.BFDTDobject method) (bfdtd.BFDTDobject.Flag method) getIndexOf() (bfdtd.RCD.RCD_HexagonalLattice method) getIndexRange() (bfdtd.meshobject.MeshObject method) getInnerRadius() (bfdtd.GeometryObjects.Cylinder method) (bfdtd.GeometryObjects.Sphere method) getInnerRadius1() (bfdtd.GeometryObjects.Cone method) getInnerRadius2() (bfdtd.GeometryObjects.Cone method) getInscribedSquarePlaneRadius() (bfdtd.SpecialTriangularPrism.SpecialTriangularPrism method) getIntersectionPoint() (bfdtd.snapshot.SnapshotBoxXYZ method) getIterations() (bfdtd.BFDTDobject.BFDTDobject method) (bfdtd.BFDTDobject.Flag method) getJfield() (bfdtd.snapshot.Snapshot method) getLambda() (bfdtd.excitation.Excitation method) (bfdtd.snapshot.FrequencySnapshot method) getLastVoxel() (GWL.GWL_parser.GWLobject method) getLatestFrequencySnapTimeNumber() (bfdtd.BFDTDobject.BFDTDobject method) getLatticeVectors() (bfdtd.RCD.RCD_HexagonalLattice method) getLimits() (GWL.GWL_parser.GWLobject method) getLocalCoordinates() (meshing.meshing.HeterogeneousMesh1D method) (meshing.meshing.HomogeneousMesh1D method) (meshing.meshing.Mesh1D method) (meshing.meshing.MultiMesh1D method) getLocalEnvelopPoints() (bfdtd.SpecialTriangularPrism.SpecialTriangularPrism method) getLocation() (bfdtd.excitation.Excitation method) (bfdtd.GeometryObjects.GeometryObject method) getLower() (bfdtd.BFDTDobject.BFDTDobject method) (bfdtd.BFDTDobject.Box method) (bfdtd.snapshot.Snapshot method) getLowerAbsolute() (bfdtd.GeometryObjects.GeometryObject method) getLowerRelative() (bfdtd.GeometryObjects.Block method) (bfdtd.GeometryObjects.Cylinder method) (bfdtd.GeometryObjects.Sphere method) getMagFromScreenSizeInMicrons() (in module FIB.FIB) getMEEPobject() (bfdtd.GeometryObjects.Block method) (bfdtd.GeometryObjects.Cylinder method) getMemoryRequirements() (bfdtd.BFDTDobject.BFDTDobject method) getMesh() (bfdtd.BFDTDobject.BFDTDobject method) (bfdtd.meshobject.MeshObject method) getMesh1DList() (meshing.meshing.MultiMesh1D method) getMeshData() (GWL.GWL_parser.GWLobject method) (GWL.SpiralSphere.SpiralSphere method) (GWL.parallelepiped.Parallelepiped method) (GWL.tilted_grating.TiltedGrating method) (GWL.tube.HorizontalCircleTubeWithConstantAngularStep method) (GWL.tube.TruncatedTube method) (GWL.tube.Tube method) (GWL.tube.TubePapa method)

getMeshDelta() (bfdtd.meshobject.MeshObject method) getMeshingParameters() (bfdtd.ellipsoid.Ellipsoid method) (bfdtd.GeometryObjects.Block method) (bfdtd.GeometryObjects.Cylinder method) (bfdtd.GeometryObjects.Distorted method) (bfdtd.GeometryObjects.MeshBox method) (bfdtd.SpecialTriangularPrism.SpecialTriangularPrism method) (bfdtd.excitation.Excitation method) (bfdtd.snapshot.Snapshot method) getMeshObject() (bfdtd.RCD.RCD_HexagonalLattice method) getMinDeltas() (bfdtd.meshobject.MeshObject method) getMinDistanceBetweenVoxels() (GWL.GWL_parser.GWLobject method) getMinMaxPoints() (GWL.parallelepiped.Parallelepiped method) getModeFilteredProbes() (bfdtd.BFDTDobject.BFDTDobject method) getName() (bfdtd.excitation.Excitation method) (bfdtd.GeometryObjects.GeometryObject method) (bfdtd.snapshot.Snapshot method) (bfdtd.snapshot.SnapshotBox method) getNcells() (bfdtd.BFDTDobject.BFDTDobject method) (bfdtd.meshobject.MeshObject method) getNcellsMin() (meshing.meshing.HomogeneousMesh1D method) getNearest() (bfdtd.meshobject.MeshObject method) getNormalizedVectors() (GWL.parallelepiped.Parallelepiped method) getNvoxels() (GWL.GWL_parser.GWLobject method) getObjects() (bfdtd.BFDTDobject.BFDTDobject method) getOuterRadius() (bfdtd.GeometryObjects.Cylinder method) (bfdtd.GeometryObjects.Sphere method) (bfdtd.RCD.RCD_HexagonalLattice method) getOuterRadius1() (bfdtd.GeometryObjects.Cone method) getOuterRadius2() (bfdtd.GeometryObjects.Cone method) getOutputColumnHeaders() (bfdtd.snapshot.FrequencySnapshot method) (bfdtd.snapshot.TimeSnapshot method) getOutputColumnHeadersSubFunction() (bfdtd.snapshot.FrequencySnapshot method) getOutputFileNames() (bfdtd.BFDTDobject.BFDTDobject method) getPeaks() (in module bin.comparePeaks) (in module bin.harminv_wrapper) getPeakTime() (bfdtd.excitation.Excitation method) getPeriod() (bfdtd.excitation.Excitation method) getPixelsPerMicron() (in module FIB.FIB) getPlaneBfdtdIndex() (bfdtd.snapshot.Snapshot method) getPlaneLetter() (bfdtd.snapshot.Snapshot method) getPlanePythonIndex() (bfdtd.snapshot.Snapshot method) getPower() (bfdtd.snapshot.TimeSnapshot method) (GWL.GWL_parser.GWLobject method) getProbeColumnFromExcitation() (in module utilities.common) getProbes() (bfdtd.BFDTDobject.BFDTDobject method) getRadius() (GWL.SpiralSphere.SpiralSphere method) getRefractiveIndex() (bfdtd.GeometryObjects.GeometryObject method) getRefractiveIndexMin() (meshing.meshing.HomogeneousMesh1D method) getRefractiveIndexSet() (bfdtd.BFDTDobject.BFDTDobject method) getRelativeConductivity() (bfdtd.GeometryObjects.GeometryObject method) getRelativePermittivity() (bfdtd.GeometryObjects.GeometryObject method) getRelativePermittivityMin() (meshing.meshing.HomogeneousMesh1D method) getRepetition() (bfdtd.snapshot.Snapshot method) getResolution() (in module FIB.FIB) getRodLength() (bfdtd.RCD.RCD_HexagonalLattice method) getRotationAxisAngle() (bfdtd.GeometryObjects.GeometryObject method) getRotationMatrix() (bfdtd.GeometryObjects.GeometryObject method) (bfdtd.GeometryObjects.Rotation method) getSimulationTime() (bfdtd.BFDTDobject.BFDTDobject method) getSize() (bfdtd.BFDTDobject.BFDTDobject method) (bfdtd.BFDTDobject.Box method) (bfdtd.GeometryObjects.Block method) (bfdtd.GeometryObjects.Cylinder method) (bfdtd.GeometryObjects.Parallelepiped method) (bfdtd.GeometryObjects.Sphere method) (bfdtd.excitation.Excitation method) (bfdtd.snapshot.Snapshot method) getSizeAndResolution() (bfdtd.BFDTDobject.BFDTDobject method) (bfdtd.meshobject.MeshObject method) getSnapshotFirstMax() (bfdtd.BFDTDobject.BFDTDobject method) getSnapshotFrequencySet() (bfdtd.BFDTDobject.BFDTDobject method) getSnapshots() (bfdtd.BFDTDobject.BFDTDobject method) getSpacingMax() (meshing.meshing.HomogeneousMesh1D method) getSplitSnapshots() (bfdtd.snapshot.EnergySnapshot method) (bfdtd.snapshot.ModeVolumeBoxFull method) getSpotSize() (in module FIB.FIB) getStartEndPoints() (bfdtd.GeometryObjects.Cylinder method) getStartingSample() (bfdtd.snapshot.FrequencySnapshot method) getStartTime() (bfdtd.excitation.Excitation method) getTemplate() (bfdtd.excitation.ExcitationWithGaussianTemplate method) (bfdtd.excitation.ExcitationWithUniformTemplate method) getThicknessList() (meshing.meshing.Mesh1D method) getTimeConstant() (bfdtd.excitation.Excitation method) getTimeOffset() (bfdtd.excitation.Excitation method) getTimeSnapshots() (bfdtd.BFDTDobject.BFDTDobject method) getTimeStep() (bfdtd.BFDTDobject.BFDTDobject method) getTimeStepFactor() (bfdtd.BFDTDobject.BFDTDobject method) (bfdtd.BFDTDobject.Flag method) getTimeStepMax() (bfdtd.BFDTDobject.BFDTDobject method) getTypeBasedOnAttributes() (bfdtd.snapshot.Snapshot method) (bfdtd.snapshot.TimeSnapshot method) getUnitCell() (bfdtd.RCD.RCD_HexagonalLattice method) getUnitCellType() (bfdtd.RCD.RCD_HexagonalLattice method) getUpper() (bfdtd.BFDTDobject.BFDTDobject method) (bfdtd.BFDTDobject.Box method) (bfdtd.snapshot.Snapshot method) getUpperAbsolute() (bfdtd.GeometryObjects.GeometryObject method) getUpperRelative() (bfdtd.GeometryObjects.Block method) (bfdtd.GeometryObjects.Cylinder method) (bfdtd.GeometryObjects.Sphere method) getuserdir() (in module utilities.getuserdir) getVecAlphaDirectionFromVar() (in module utilities.common) getVerticesAbsolute() (bfdtd.GeometryObjects.Distorted method) getVerticesRelative() (bfdtd.GeometryObjects.Distorted method) getVoxelDimensions() (bfdtd.SpecialTriangularPrism.SpecialTriangularPrism method) getVoxels() (bfdtd.ellipsoid.Ellipsoid method) (GWL.GWL_parser.GWLobject method) (bfdtd.SpecialTriangularPrism.SpecialTriangularPrism method) (bfdtd.triangular_prism.TriangularPrism method) getWallTime() (bfdtd.BFDTDobject.BFDTDobject method) getWavelength() (bfdtd.excitation.Excitation method) getWavelengthMax() (bfdtd.excitation.Excitation method) getWavelengthMin() (bfdtd.excitation.Excitation method) getWavelengthRange() (bfdtd.excitation.Excitation method) getXmesh() (bfdtd.BFDTDobject.BFDTDobject method) (bfdtd.meshobject.MeshObject method) getXMesh() (bfdtd.RCD.RCD_HexagonalLattice method) getXMesh_with_SpacingMax() (bfdtd.RCD.RCD_HexagonalLattice method) getXmeshCentres() (bfdtd.meshobject.MeshObject method) getXmeshDelta() (bfdtd.meshobject.MeshObject method) getYmesh() (bfdtd.BFDTDobject.BFDTDobject method) (bfdtd.meshobject.MeshObject method) getYMesh() (bfdtd.RCD.RCD_HexagonalLattice method) getYMesh_with_SpacingMax() (bfdtd.RCD.RCD_HexagonalLattice method) getYmeshCentres() (bfdtd.meshobject.MeshObject method) getYmeshDelta() (bfdtd.meshobject.MeshObject method) getZmesh() (bfdtd.BFDTDobject.BFDTDobject method) (bfdtd.meshobject.MeshObject method) getZMesh() (bfdtd.RCD.RCD_HexagonalLattice method) getZMesh_with_SpacingMax() (bfdtd.RCD.RCD_HexagonalLattice method) getZmeshCentres() (bfdtd.meshobject.MeshObject method) getZmeshDelta() (bfdtd.meshobject.MeshObject method) global2local() (bfdtd.SpecialTriangularPrism.SpecialTriangularPrism method) GWL (module) GWL.bmesh (module) GWL.box (module) GWL.foobar_file (module) GWL.generate_sphere (module) GWL.GWL_parser (module) GWL.parallelepiped (module) GWL.rotation_example (module) GWL.SpiralPhasePlate (module) GWL.SpiralSphere (module) GWL.tilted_grating (module) GWL.tube (module) GWL.woodpile (module) GWL.woodpile_grid (module) GWL_voxels (GWL.GWL_parser.GWLobject attribute) GWLobject (class in GWL.GWL_parser)

H

hackMesh() (in module meshing.meshing) HalfTubeLargeWithInnerAndOuter (class in GWL.tube) harminv() (in module bin.harminv_wrapper) harminv_top_probes() (in module bin.harminv_wrapper) heightStep (GWL.SpiralPhasePlate.SpiralPhasePlate attribute)

help() (in module constants.physcon) HeterogeneousMesh1D (class in meshing.meshing) HomogeneousMesh1D (class in meshing.meshing) HomogeneousMeshParameters1D (class in meshing.meshing) HorizontalCircleTubeWithConstantAngularStep (class in GWL.tube)

I

Identity() (in module utilities.TransformationMatrix) increaseResolution() (in module meshing.meshing)

increaseResolution3D() (in module bfdtd.meshobject) int_array() (in module utilities.common) is_number() (in module utilities.common)

L

LimitsToThickness() (in module utilities.common) LineNumber_vec3 (GWL.parallelepiped.Parallelepiped attribute) linspaces() (in module meshing.meshing)

local2global() (bfdtd.SpecialTriangularPrism.SpecialTriangularPrism method) location (crystals.RCD_CubicLattice.RCD_CubicLattice attribute) LogMesh1D (class in meshing.meshing)

M

Mag() (in module utilities.TransformationMatrix) Mag2() (in module utilities.TransformationMatrix) main() (in module bfdtd.bristolFDTD_generator_functions) (in module GWL.GWL_parser) (in module GWL.SpiralSphere) (in module GWL.box) (in module GWL.tilted_grating) (in module GWL.woodpile) (in module bfdtd.RCD_waveguides) (in module bin.BFDTD_fix_filenames) (in module bin.addPowerCompensation) (in module bin.bfdtd_rename) (in module bin.bfdtd_tool) (in module bin.copyBFDTD) (in module bin.efficiency_run) (in module bin.harminv_wrapper) (in module bin.qstat) (in module bin.rerun_with_new_excitation) (in module bin.resonance_run) (in module special_ops.SO_reportGenerator) (in module special_ops.woodpile_generator_Xu_rotated_around_Z) (in module third_party.geniegui) main_argparseui() (in module bin.bfdtd_tool)

main_buildparser() (in module third_party.geniegui) makeAllSubMeshesChildren() (meshing.meshing.MultiMesh1D method) matlab_range() (in module utilities.common) maxDistanceBetweenLines (GWL.GWL_parser.GWLobject attribute) maxHeight (GWL.SpiralPhasePlate.SpiralPhasePlate attribute) maximum_mesh_delta_ratio (meshing.meshing.MultiMesh1D attribute) maximum_mesh_delta_vacuum (meshing.meshing.MultiMesh1D attribute) mergeMeshingParameters() (in module meshing.meshing) mergePictures() (in module special_ops.SO_delimages) Mesh1D (class in meshing.meshing) Mesh3D (class in meshing.meshing) mesh_list (meshing.meshing.MultiMesh1D attribute) MeshBox (class in bfdtd.GeometryObjects) meshing (module) meshing.meshing (module), [1] MeshingParameters (class in bfdtd.meshobject) MeshObject (class in bfdtd.meshobject) method (crystals.RCD_CubicLattice.RCD_GWL_Cylinder attribute) minDistanceBetweenLines (GWL.GWL_parser.GWLobject attribute) minimum_mesh_delta (meshing.meshing.MultiMesh1D attribute) ModeFilteredProbe (class in bfdtd.snapshot) ModeVolumeBox (class in bfdtd.snapshot) ModeVolumeBoxFull (class in bfdtd.snapshot) MultiMesh1D (class in meshing.meshing)

N

N_Discontinuities (GWL.SpiralPhasePlate.SpiralPhasePlate attribute) N_HeightSteps (GWL.SpiralPhasePlate.SpiralPhasePlate attribute) name (meshing.meshing.Mesh1D attribute) (meshing.meshing.Mesh3D attribute) (meshing.meshing.MultiMesh1D attribute) new() (GWL.bmesh.BMEdgeSeq method) (GWL.bmesh.BMFaceSeq method) (GWL.bmesh.BMVertSeq method) (in module GWL.bmesh) newguiprocess() (in module third_party.geniegui)

Nlayers_Z (GWL.woodpile.Woodpile attribute) NRodsPerLayer_X (GWL.woodpile.Woodpile attribute) NRodsPerLayer_Y (GWL.woodpile.Woodpile attribute) nukenewlines() (in module utilities.dumpObj) numID_to_alphaID_FrequencySnapshot() (in module utilities.brisFDTD_ID_info) numID_to_alphaID_ModeFilteredProbe() (in module utilities.brisFDTD_ID_info) numID_to_alphaID_Probe() (in module utilities.brisFDTD_ID_info) numID_to_alphaID_TimeSnapshot() (in module utilities.brisFDTD_ID_info) Nx (bfdtd.bfdtd_parser.FDTDdataObject attribute) Ny (bfdtd.bfdtd_parser.FDTDdataObject attribute) Nz (bfdtd.bfdtd_parser.FDTDdataObject attribute)

O

Orthogonal() (in module utilities.common)

overlap_vec3 (GWL.parallelepiped.Parallelepiped attribute) overlap_vec3_xyz (GWL.parallelepiped.Parallelepiped attribute)

P

Parallelepiped (class in bfdtd.GeometryObjects) (class in GWL.parallelepiped) parseQstatFullOutput() (in module bin.qstat) PC_bool_InverseWriting (GWL.GWL_parser.GWLobject attribute) PC_bool_LaserPowerCommand (GWL.GWL_parser.GWLobject attribute) PC_float_height (GWL.GWL_parser.GWLobject attribute) PC_interfaceAt (GWL.GWL_parser.GWLobject attribute) PC_laser_power_at_z0 (GWL.GWL_parser.GWLobject attribute) PC_slope (GWL.GWL_parser.GWLobject attribute) phiStep (GWL.SpiralPhasePlate.SpiralPhasePlate attribute) plane (bfdtd.snapshot.Snapshot attribute) planeNumberName() (in module utilities.common) poll() (third_party.geniegui.ArgparseGUI method) PositionMaximum (GWL.GWL_parser.GWLobject attribute) PositionMinimum (GWL.GWL_parser.GWLobject attribute) prettyPrint() (in module utilities.dumpObj) prettyPrintCols() (in module utilities.dumpObj) print_attributes() (in module third_party.geniegui) printAll() (in module bin.bfdtd_tool)

printDict() (in module utilities.dumpObj) printExcitation() (in module bin.bfdtd_tool) printExcitationDirection() (in module bin.bfdtd_tool) printFormattedString() (in module bin.bfdtd_tool) printFrequencySnapshotInfo() (in module bin.bfdtd_tool) printHarminvOutput() (in module utilities.prnutils) printHarminvOutputDirect() (in module utilities.prnutils) printHarminvOutputSelection() (in module utilities.prnutils) printInfo() (bfdtd.BFDTDobject.BFDTDobject method) (bfdtd.excitation.Excitation method) printNcells() (in module bin.bfdtd_tool) PrintSelf() (meshing.meshing.HeterogeneousMesh1D method) (meshing.meshing.HomogeneousMesh1D method) (meshing.meshing.Mesh1D method) (meshing.meshing.Mesh3D method) (meshing.meshing.MultiMesh1D method) printSnapshotFrequencyList() (in module bin.bfdtd_tool) prnToVariables() (in module utilities.prnutils) processFiles() (in module bin.BFDTD_fix_filenames)

Q

QuadrupleExcitation() (in module bfdtd.excitation_utilities)

R

radialStep (GWL.SpiralPhasePlate.SpiralPhasePlate attribute) radius (GWL.SpiralPhasePlate.SpiralPhasePlate attribute) RCD111_waveguide_vector_dictionary() (in module bfdtd.RCD) RCD_CubicLattice (class in crystals.RCD_CubicLattice) RCD_GWL_Cylinder (class in crystals.RCD_CubicLattice) RCD_GWL_Parallelepiped (class in crystals.RCD_CubicLattice) RCD_HexagonalLattice (class in bfdtd.RCD) RCD_HexagonalLattice_ChiralWaveguide (class in bfdtd.RCD_waveguides) RCD_vector_dictionary() (in module bfdtd.RCD) read() (third_party.geniegui.TextPipe method) read_data() (bfdtd.snapshot.Snapshot method) read_entry() (bfdtd.BFDTDobject.Boundaries method) (bfdtd.BFDTDobject.Box method) (bfdtd.BFDTDobject.Flag method) (bfdtd.GeometryObjects.Block method) (bfdtd.GeometryObjects.Cylinder method) (bfdtd.GeometryObjects.Distorted method) (bfdtd.GeometryObjects.Rotation method) (bfdtd.GeometryObjects.Sphere method) (bfdtd.excitation.Excitation method) (bfdtd.snapshot.FrequencySnapshot method) (bfdtd.snapshot.TimeSnapshot method) readBristolFDTD() (bfdtd.BFDTDobject.BFDTDobject method) (in module bfdtd.bfdtd_parser) readDataFrequencySnapshots() (bfdtd.BFDTDobject.BFDTDobject method) readDataTimeSnapshots() (bfdtd.BFDTDobject.BFDTDobject method) readFileList() (bfdtd.BFDTDobject.BFDTDobject method) readGWL() (GWL.GWL_parser.GWLobject method) readHarminvOutput() (in module utilities.prnutils) readHarminvOutputDirect() (in module utilities.prnutils) readHarminvOutputSelection() (in module utilities.prnutils) readInputFile() (bfdtd.BFDTDobject.BFDTDobject method) readPrnFile() (in module utilities.prnutils) readPrnFile_old() (in module utilities.prnutils) readProbeFile() (in module utilities.prnutils)

ReadRotateWrite() (in module special_ops.ReadRotateWrite) readStrFile() (in module FIB.FIB) readSubstitutes() (GWL.GWL_parser.GWLobject method) relsd() (in module constants.physcon) rename() (in module bin.bfdtd_rename) renderInBlender() (meshing.meshing.HomogeneousMesh1D method) (meshing.meshing.MultiMesh1D method) renderXMesh1D() (meshing.meshing.HomogeneousMesh1D method) (meshing.meshing.MultiMesh1D method) renderYMesh1D() (meshing.meshing.HomogeneousMesh1D method) (meshing.meshing.MultiMesh1D method) renderZMesh1D() (meshing.meshing.HomogeneousMesh1D method) (meshing.meshing.MultiMesh1D method) reportGenerator() (in module special_ops.SO_reportGenerator) reshapeData() (in module utilities.prnutils) resolutionScalingFactor (meshing.meshing.Mesh1D attribute) resonance_run() (in module bin.resonance_run) reverse() (GWL.GWL_parser.GWLobject method) reverse_line_order_on_write (GWL.GWL_parser.GWLobject attribute) reverse_voxel_order_per_line_on_write (GWL.GWL_parser.GWLobject attribute) rotate() (bfdtd.BFDTDobject.BFDTDobject method) (GWL.GWL_parser.GWLobject method) (bfdtd.GeometryObjects.GeometryObject method) (in module bin.bfdtd_tool) Rotation (class in bfdtd.GeometryObjects) Rotation() (in module utilities.TransformationMatrix) rotation_matrix3() (in module utilities.common) rotation_matrix4() (in module utilities.common) rotationMatrix() (in module utilities.TransformationMatrix) rotationTest (module) runcommand() (third_party.geniegui.ArgparseGUI method) runCommandAndStoreOutput() (in module utilities.common) rungui() (in module third_party.geniegui) runguiprocess() (in module third_party.geniegui) runSimulation() (bfdtd.BFDTDobject.BFDTDobject method) (in module utilities.common)

S

sampleFunction() (bfdtd.BFDTDobject.BFDTDobject method) Scale() (in module utilities.TransformationMatrix) sd() (in module constants.physcon) set2D() (bfdtd.BFDTDobject.BFDTDobject method) (bfdtd.BFDTDobject.Flag method) set3D() (bfdtd.BFDTDobject.BFDTDobject method) (bfdtd.BFDTDobject.Flag method) set_lower_to_origin (GWL.GWL_parser.GWLobject attribute) setAllowResolutionScaling() (meshing.meshing.Mesh1D method) (meshing.meshing.Mesh3D method) (meshing.meshing.MultiMesh1D method) setAmplitude() (bfdtd.excitation.Excitation method) setAngularStepDegrees() (GWL.tube.Tube method) setAttributesFromParsedOptions() (bfdtd.BFDTDobject.BFDTDobject method) (GWL.GWL_parser.GWLobject method) (GWL.SpiralPhasePlate.SpiralPhasePlate method) (crystals.RCD_CubicLattice.RCD_CubicLattice method) (crystals.RCD_CubicLattice.RCD_GWL_Cylinder method) (crystals.RCD_CubicLattice.RCD_GWL_Parallelepiped method) setAutosetExcitationStartTime() (bfdtd.BFDTDobject.BFDTDobject method) setAutosetFrequencySnapshotSettings() (bfdtd.BFDTDobject.BFDTDobject method) setAutosetNFrequencySnapshots() (bfdtd.BFDTDobject.BFDTDobject method) setAxes() (bfdtd.GeometryObjects.Parallelepiped method) setAxis() (bfdtd.GeometryObjects.Cylinder method) setBaseSnapshot() (bfdtd.snapshot.SnapshotBox method) setBoundaryConditionsNormal() (bfdtd.BFDTDobject.Boundaries method) setBoundaryConditionsToPML() (bfdtd.BFDTDobject.BFDTDobject method) (bfdtd.BFDTDobject.Boundaries method) setBoundaryConditionsXnegToPML() (bfdtd.BFDTDobject.Boundaries method) setBoundaryConditionsXposToPML() (bfdtd.BFDTDobject.Boundaries method) setBoundaryConditionsYnegToPML() (bfdtd.BFDTDobject.Boundaries method) setBoundaryConditionsYposToPML() (bfdtd.BFDTDobject.Boundaries method) setBoundaryConditionsZnegToPML() (bfdtd.BFDTDobject.Boundaries method) setBoundaryConditionsZposToPML() (bfdtd.BFDTDobject.Boundaries method) setCentro() (bfdtd.BFDTDobject.Box method) (GWL.tube.HorizontalCircleTubeWithConstantAngularStep method) (GWL.tube.Tube method) (bfdtd.excitation.Excitation method) (bfdtd.snapshot.Snapshot method) setCubicUnitCellSize() (bfdtd.RCD.RCD_HexagonalLattice method) setData() (bfdtd.bfdtd_parser.FDTDdataObject method) setDataPaths() (bfdtd.BFDTDobject.BFDTDobject method) setDefaultRefractiveIndex() (bfdtd.BFDTDobject.BFDTDobject method) setDefaultRelativeConductivity() (bfdtd.BFDTDobject.BFDTDobject method) setDefaultRelativePermittivity() (bfdtd.BFDTDobject.BFDTDobject method) setDefaults() (bfdtd.snapshot.EpsilonSnapshot method) setDiametre() (bfdtd.GeometryObjects.Cylinder method) (GWL.SpiralSphere.SpiralSphere method) setDirectionsAndSize() (bfdtd.GeometryObjects.Parallelepiped method) setEfield() (bfdtd.snapshot.Snapshot method) setEndTime() (bfdtd.excitation.Excitation method) setEpsilon() (bfdtd.snapshot.TimeSnapshot method) setEx() (bfdtd.excitation.Excitation method) setExcitations() (bfdtd.BFDTDobject.BFDTDobject method) setExecutable() (bfdtd.BFDTDobject.BFDTDobject method) setExtension() (bfdtd.BFDTDobject.Box method) (bfdtd.excitation.Excitation method) (bfdtd.snapshot.Snapshot method) (bfdtd.snapshot.SnapshotBox method) (meshing.meshing.HomogeneousMesh1D method) setExtensionFromSnapshot() (bfdtd.snapshot.Snapshot method) setExtensionX() (bfdtd.snapshot.Snapshot method) setExtensionY() (bfdtd.snapshot.Snapshot method) setExtensionZ() (bfdtd.snapshot.Snapshot method) setEy() (bfdtd.excitation.Excitation method) setEz() (bfdtd.excitation.Excitation method) setFileBaseName() (bfdtd.BFDTDobject.BFDTDobject method) setFileList() (bfdtd.BFDTDobject.BFDTDobject method) setFirst() (bfdtd.snapshot.Snapshot method) (bfdtd.snapshot.SnapshotBox method) setFrequencies() (bfdtd.snapshot.FrequencySnapshot method) setFrequency() (bfdtd.excitation.Excitation method) setFrequencyRange() (bfdtd.excitation.Excitation method) setFromLine() (GWL.parallelepiped.Parallelepiped method) setFromSnapshot() (bfdtd.snapshot.EnergySnapshot method) (bfdtd.snapshot.EpsilonSnapshot method) (bfdtd.snapshot.FrequencySnapshot method) (bfdtd.snapshot.Snapshot method) setFullExtensionOff() (bfdtd.snapshot.Snapshot method) setFullExtensionOn() (bfdtd.snapshot.Snapshot method) setGeoCentre() (bfdtd.SpecialTriangularPrism.SpecialTriangularPrism method) setGeometryObjects() (bfdtd.BFDTDobject.BFDTDobject method) setGroup() (bfdtd.snapshot.Snapshot method) setHeight() (bfdtd.GeometryObjects.Cylinder method) (GWL.tube.Tube method) setHfield() (bfdtd.snapshot.Snapshot method) setIdString() (bfdtd.BFDTDobject.BFDTDobject method) (bfdtd.BFDTDobject.Flag method) setInnerRadius() (bfdtd.GeometryObjects.Cylinder method) (GWL.tube.Tube method) (bfdtd.GeometryObjects.Sphere method) setInnerRadius2() (bfdtd.GeometryObjects.Cone method) setIntersectionPoint() (bfdtd.snapshot.SnapshotBoxXYZ method) setIterations() (bfdtd.BFDTDobject.BFDTDobject method) (bfdtd.BFDTDobject.Flag method) setJfield() (bfdtd.snapshot.Snapshot method) setLambda() (bfdtd.excitation.Excitation method) setLayer() (bfdtd.snapshot.Snapshot method) setLineNumberAndDistance_XY() (GWL.woodpile.Woodpile method) setLineNumberAndDistance_Z() (GWL.woodpile.Woodpile method) setLocation() (bfdtd.excitation.Excitation method) (bfdtd.GeometryObjects.GeometryObject method) (bfdtd.RCD.RCD_HexagonalLattice method) setLower() (bfdtd.BFDTDobject.Box method) setLowerAbsolute() (bfdtd.GeometryObjects.Block method) setLowerRelative() (bfdtd.GeometryObjects.Block method) setMesh() (bfdtd.BFDTDobject.BFDTDobject method) (bfdtd.meshobject.MeshObject method) setMeshDelta() (bfdtd.meshobject.MeshObject method) setName() (bfdtd.excitation.Excitation method) (bfdtd.GeometryObjects.GeometryObject method) (bfdtd.snapshot.Snapshot method) setNcellsMin() (meshing.meshing.HomogeneousMesh1D method) setNumberOfSteps_R() (GWL.tube.HorizontalCircleTubeWithConstantAngularStep method) (GWL.tube.Tube method) setNumberOfSteps_Theta() (GWL.tube.HorizontalCircleTubeWithConstantAngularStep method) (GWL.tube.Tube method) setNumberOfSteps_Z() (GWL.tube.HorizontalCircleTubeWithConstantAngularStep method) (GWL.tube.Tube method) setOrigin() (bfdtd.GeometryObjects.Distorted method) setOriginToGeometry() (bfdtd.GeometryObjects.Block method) (bfdtd.GeometryObjects.Distorted method) setOuterRadius() (bfdtd.GeometryObjects.Cylinder method) (GWL.tube.Tube method) (bfdtd.GeometryObjects.Sphere method) (bfdtd.RCD.RCD_HexagonalLattice method)

setOuterRadius2() (bfdtd.GeometryObjects.Cone method) setOverlap3() (GWL.woodpile.Woodpile method) setPeakTime() (bfdtd.excitation.Excitation method) setPeriod() (bfdtd.excitation.Excitation method) setPlaneBfdtdIndex() (bfdtd.snapshot.Snapshot method) setPlaneLetter() (bfdtd.snapshot.Snapshot method) setPlaneOrientationX() (bfdtd.snapshot.Snapshot method) (bfdtd.snapshot.SnapshotBoxVolume method) setPlaneOrientationY() (bfdtd.snapshot.Snapshot method) (bfdtd.snapshot.SnapshotBoxVolume method) setPlaneOrientationZ() (bfdtd.snapshot.Snapshot method) (bfdtd.snapshot.SnapshotBoxVolume method) setPlanePythonIndex() (bfdtd.snapshot.Snapshot method) setPower() (bfdtd.snapshot.TimeSnapshot method) setProperty() (GWL.foobar_file.foobarClass method) setRadius() (GWL.SpiralSphere.SpiralSphere method) setRefractiveIndex() (bfdtd.GeometryObjects.GeometryObject method) setRefractiveIndexMin() (meshing.meshing.HomogeneousMesh1D method) setRelativeConductivity() (bfdtd.GeometryObjects.GeometryObject method) setRelativePermittivity() (bfdtd.GeometryObjects.GeometryObject method) setRelativePermittivityMin() (meshing.meshing.HomogeneousMesh1D method) setRepetition() (bfdtd.snapshot.Snapshot method) (bfdtd.snapshot.SnapshotBox method) setResolutionScalingFactor() (meshing.meshing.Mesh1D method) (meshing.meshing.Mesh3D method) (meshing.meshing.MultiMesh1D method) setRodHeight() (GWL.woodpile.Woodpile method) setRodType() (GWL.woodpile.Woodpile method) setRodWidth() (GWL.woodpile.Woodpile method) setRotationAxisAngle() (bfdtd.GeometryObjects.GeometryObject method) setSafetyChecks() (bfdtd.BFDTDobject.BFDTDobject method) setShifted() (bfdtd.RCD.RCD_HexagonalLattice method) setSimulationTime() (bfdtd.BFDTDobject.BFDTDobject method) setSize() (bfdtd.BFDTDobject.Box method) (bfdtd.GeometryObjects.Block method) (bfdtd.GeometryObjects.Cylinder method) (bfdtd.GeometryObjects.Parallelepiped method) (bfdtd.GeometryObjects.Sphere method) (bfdtd.excitation.Excitation method) (bfdtd.snapshot.Snapshot method) setSizeAndResolution() (bfdtd.BFDTDobject.BFDTDobject method) (bfdtd.meshobject.MeshObject method) setSizeFromVectors() (GWL.parallelepiped.Parallelepiped method) setSnapshots() (bfdtd.BFDTDobject.BFDTDobject method) setSpacingMax() (meshing.meshing.HomogeneousMesh1D method) setStart_R() (GWL.tube.HorizontalCircleTubeWithConstantAngularStep method) (GWL.tube.Tube method) setStart_ThetaDegrees() (GWL.tube.HorizontalCircleTubeWithConstantAngularStep method) (GWL.tube.Tube method) setStart_Z() (GWL.tube.HorizontalCircleTubeWithConstantAngularStep method) (GWL.tube.Tube method) setStartEndPoints() (bfdtd.GeometryObjects.Cylinder method) setStartingSample() (bfdtd.snapshot.FrequencySnapshot method) (bfdtd.snapshot.Snapshot method) (bfdtd.snapshot.SnapshotBox method) setStartTime() (bfdtd.excitation.Excitation method) setStepSize_R() (GWL.tube.HorizontalCircleTubeWithConstantAngularStep method) (GWL.tube.Tube method) setStepSize_ThetaDegrees() (GWL.tube.HorizontalCircleTubeWithConstantAngularStep method) (GWL.tube.Tube method) setStepSize_Z() (GWL.tube.HorizontalCircleTubeWithConstantAngularStep method) (GWL.tube.Tube method) setTimeConstant() (bfdtd.excitation.Excitation method) setTimeOffset() (bfdtd.excitation.Excitation method) setTimeStep() (bfdtd.BFDTDobject.BFDTDobject method) setTimeStepFactor() (bfdtd.BFDTDobject.BFDTDobject method) (bfdtd.BFDTDobject.Flag method) setUnitCellType() (bfdtd.RCD.RCD_HexagonalLattice method) setup() (bfdtd.snapshot.ModeVolumeBoxFull method) setUp() (meshing.meshing.test_Meshing method) setupEnergySnapshotBox() (bfdtd.snapshot.ModeVolumeBox method) setupEpsilonSnapshot() (bfdtd.snapshot.EnergySnapshot method) setUpper() (bfdtd.BFDTDobject.Box method) setUpperAbsolute() (bfdtd.GeometryObjects.Block method) setUpperRelative() (bfdtd.GeometryObjects.Block method) setupSnapshotBox() (bfdtd.snapshot.TimeSnapshotBox method) setupSnapshots() (bfdtd.snapshot.SnapshotBoxVolume method) setUseForMeshing() (bfdtd.snapshot.Snapshot method) (meshing.meshing.Mesh1D method) (meshing.meshing.Mesh3D method) (meshing.meshing.MultiMesh1D method) setVerbosity() (bfdtd.BFDTDobject.BFDTDobject method) setVerticesAbsolute() (bfdtd.GeometryObjects.Distorted method) setVerticesRelative() (bfdtd.GeometryObjects.Distorted method) setVoxels() (GWL.GWL_parser.GWLobject method) setVoxelSize3() (GWL.woodpile.Woodpile method) setWallTime() (bfdtd.BFDTDobject.BFDTDobject method) setWavelength() (bfdtd.excitation.Excitation method) setWavelengthRange() (bfdtd.excitation.Excitation method) setWavelengths() (bfdtd.snapshot.FrequencySnapshot method) setWorkDir() (bfdtd.BFDTDobject.BFDTDobject method) setXmesh() (bfdtd.meshobject.MeshObject method) setXmeshDelta() (bfdtd.meshobject.MeshObject method) setYmesh() (bfdtd.meshobject.MeshObject method) setYmeshDelta() (bfdtd.meshobject.MeshObject method) setZmesh() (bfdtd.meshobject.MeshObject method) setZmeshDelta() (bfdtd.meshobject.MeshObject method) single_woodpile() (in module GWL.woodpile_grid) size_vec3 (GWL.parallelepiped.Parallelepiped attribute) Snapshot (class in bfdtd.snapshot) SnapshotBox (class in bfdtd.snapshot) SnapshotBoxSurface (class in bfdtd.snapshot) SnapshotBoxVolume (class in bfdtd.snapshot) SnapshotBoxXYZ (class in bfdtd.snapshot) special_ops (module) special_ops.elliptify (module) special_ops.ReadRotateWrite (module) special_ops.SO_delimages (module) special_ops.SO_reportGenerator (module) special_ops.woodpile_generator_Xu_rotated_around_Z (module) SpecialTriangularPrism (class in bfdtd.SpecialTriangularPrism) Sphere (class in bfdtd.GeometryObjects) SpiralPhasePlate (class in GWL.SpiralPhasePlate) SpiralSphere (class in GWL.SpiralSphere) startNewVoxelSequence() (GWL.GWL_parser.GWLobject method) std_redirector() (in module third_party.geniegui) str2list() (in module utilities.common) subGridMultiLayer() (in module meshing.meshing) substituteExtension() (in module utilities.common) suppressorFunction_Xmax() (in module GWL.tube) symmetrifyAndSubtractOdd() (in module utilities.common) symmetrifyEven() (in module utilities.common) symmetrifyOdd() (in module utilities.common)

T

test() (in module GWL.SpiralSphere) (in module third_party.geniegui) test0() (in module bfdtd.ellipsoid) (in module GWL.parallelepiped) test1() (in module bfdtd.ellipsoid) (in module GWL.GWL_parser) (in module GWL.parallelepiped) test2() (in module GWL.GWL_parser) Test_brisFDTD_ID_info_Functions (class in utilities.brisFDTD_ID_info) test_FrequencySnapshotID_List_post_2008_BFDTD_version() (utilities.brisFDTD_ID_info.Test_brisFDTD_ID_info_Functions method) test_FrequencySnapshotID_List_pre_2008_BFDTD_version() (utilities.brisFDTD_ID_info.Test_brisFDTD_ID_info_Functions method) test_FrequencySnapshotID_ViceVersa_post_2008_BFDTD_version() (utilities.brisFDTD_ID_info.Test_brisFDTD_ID_info_Functions method) test_FrequencySnapshotID_ViceVersa_pre_2008_BFDTD_version() (utilities.brisFDTD_ID_info.Test_brisFDTD_ID_info_Functions method) test_interactive() (in module bfdtd.snapshot) test_linspaces() (meshing.meshing.test_Meshing method) test_mergeMeshingParameters() (meshing.meshing.test_Meshing method) test_Meshing (class in meshing.meshing) test_MeshPostprocessing() (meshing.meshing.test_Meshing method) test_ModeFilteredProbeID_List() (utilities.brisFDTD_ID_info.Test_brisFDTD_ID_info_Functions method) test_ModeFilteredProbeID_ViceVersa() (utilities.brisFDTD_ID_info.Test_brisFDTD_ID_info_Functions method) test_nuke() (meshing.meshing.test_Meshing method) test_parenting() (meshing.meshing.test_Meshing method) test_printing() (meshing.meshing.test_Meshing method) test_ProbeID_List() (utilities.brisFDTD_ID_info.Test_brisFDTD_ID_info_Functions method) test_ProbeID_ViceVersa() (utilities.brisFDTD_ID_info.Test_brisFDTD_ID_info_Functions method) test_RCD_BFDTD_0() (in module crystals.RCD_CubicLattice) test_RCD_BFDTD_1() (in module crystals.RCD_CubicLattice) test_RCD_BFDTD_2() (in module crystals.RCD_CubicLattice) test_RCD_BFDTD_unitcell() (in module crystals.RCD_CubicLattice) test_RCD_GWL() (in module crystals.RCD_CubicLattice) test_subGridMultiLayer() (meshing.meshing.test_Meshing method)

test_TimeSnapshotID_List() (utilities.brisFDTD_ID_info.Test_brisFDTD_ID_info_Functions method) test_TimeSnapshotID_ViceVersa() (utilities.brisFDTD_ID_info.Test_brisFDTD_ID_info_Functions method) testCylinderRotation() (in module bfdtd.bfdtd_parser) testGWLobject() (in module GWL.SpiralPhasePlate) testParallelpiped() (in module bfdtd.bfdtd_parser) testSpirals() (in module GWL.SpiralPhasePlate) testTruncatedTube() (in module GWL.tube) testTube() (in module GWL.tube) testWriting() (in module bfdtd.bfdtd_parser) tetra() (bfdtd.RCD.RCD_HexagonalLattice method) TextPipe (class in third_party.geniegui) third_party (module) third_party.geniegui (module) TiltedGrating (class in GWL.tilted_grating) TimeSnapshot (class in bfdtd.snapshot) TimeSnapshotBox (class in bfdtd.snapshot) TimeSnapshotBoxFull (class in bfdtd.snapshot) timestodelta() (in module utilities.common) todatetime() (in module utilities.common) translate() (bfdtd.BFDTDobject.BFDTDobject method) (bfdtd.BFDTDobject.Box method) (bfdtd.GeometryObjects.GeometryObject method) (bfdtd.excitation.Excitation method) Translation() (in module utilities.TransformationMatrix) TriangularPrism (class in bfdtd.triangular_prism) TruncatedTube (class in GWL.tube) truncateGeoList() (in module bfdtd.bfdtd_parser) truncateMeshList() (in module meshing.meshing) Tube (class in GWL.tube) TubeLarge (class in GWL.tube) TubePapa (class in GWL.tube)

U

Unit() (in module utilities.TransformationMatrix) unitCell() (bfdtd.RCD_waveguides.RCD_HexagonalLattice_ChiralWaveguide method) unitCellType1() (bfdtd.RCD.FRD_HexagonalLattice method) (bfdtd.RCD.RCD_HexagonalLattice method) unitCellType2() (bfdtd.RCD.FRD_HexagonalLattice method) (bfdtd.RCD.RCD_HexagonalLattice method) unitVector() (in module utilities.common) updateLimits() (GWL.GWL_parser.GWLobject method) updateTemplate() (bfdtd.excitation.ExcitationWithGaussianTemplate method) (bfdtd.excitation.ExcitationWithUniformTemplate method)

updateVertices() (bfdtd.GeometryObjects.Parallelepiped method) usage_example() (in module GWL.tube) useForMeshing (meshing.meshing.Mesh1D attribute) utilities (module) utilities.brisFDTD_ID_info (module) utilities.common (module) utilities.createGUI (module) utilities.dumpObj (module) utilities.getuserdir (module) utilities.prnutils (module) utilities.TransformationMatrix (module)

V

value() (in module constants.physcon)

voxelsize_vec3 (GWL.parallelepiped.Parallelepiped attribute) voxelsize_vec3_xyz (GWL.parallelepiped.Parallelepiped attribute)

W

Woodpile (class in GWL.woodpile) write() (third_party.geniegui.TextPipe method) write_BFDTD() (GWL.woodpile.Woodpile method) write_data() (bfdtd.snapshot.EnergySnapshot method) (bfdtd.snapshot.ModeVolumeBox method) (bfdtd.snapshot.Snapshot method) (bfdtd.snapshot.SnapshotBoxVolume method) (bfdtd.snapshot.TimeSnapshotBox method) write_data_row() (bfdtd.snapshot.FrequencySnapshot method) (bfdtd.snapshot.TimeSnapshot method) write_entry() (bfdtd.BFDTDobject.Boundaries method) (bfdtd.BFDTDobject.Box method) (bfdtd.BFDTDobject.Flag method) (bfdtd.GeometryObjects.Block method) (bfdtd.GeometryObjects.Cylinder method) (bfdtd.GeometryObjects.Distorted method) (bfdtd.GeometryObjects.MeshBox method) (bfdtd.GeometryObjects.Rotation method) (bfdtd.GeometryObjects.Sphere method) (bfdtd.RCD.RCD_HexagonalLattice method) (bfdtd.SpecialTriangularPrism.SpecialTriangularPrism method) (bfdtd.ellipsoid.Ellipsoid method) (bfdtd.excitation.Excitation method) (bfdtd.excitation.ExcitationWithGaussianTemplate method) (bfdtd.excitation.ExcitationWithUniformTemplate method) (bfdtd.meshobject.MeshObject method) (bfdtd.snapshot.EnergySnapshot method) (bfdtd.snapshot.EpsilonBox method) (bfdtd.snapshot.EpsilonBoxFull method) (bfdtd.snapshot.FrequencySnapshot method) (bfdtd.snapshot.ModeVolumeBox method) (bfdtd.snapshot.ModeVolumeBoxFull method) (bfdtd.snapshot.Snapshot method) (bfdtd.snapshot.SnapshotBox method) (bfdtd.snapshot.SnapshotBoxSurface method) (bfdtd.snapshot.SnapshotBoxVolume method) (bfdtd.snapshot.SnapshotBoxXYZ method) (bfdtd.snapshot.TimeSnapshot method) (bfdtd.snapshot.TimeSnapshotBox method) (bfdtd.snapshot.TimeSnapshotBoxFull method) (bfdtd.triangular_prism.TriangularPrism method)

write_GWL() (GWL.woodpile.Woodpile method) write_power (GWL.GWL_parser.GWLobject attribute) writeAll() (bfdtd.BFDTDobject.BFDTDobject method) writeBFDTD() (GWL.woodpile.Woodpile method) writeCondorScript() (bfdtd.BFDTDobject.BFDTDobject method) writeCTL() (bfdtd.BFDTDobject.Box method) (bfdtd.GeometryObjects.Block method) (bfdtd.GeometryObjects.Cylinder method) (bfdtd.GeometryObjects.Sphere method) writeCtlFile() (bfdtd.BFDTDobject.BFDTDobject method) writeDatFile() (bfdtd.excitationTemplate.ExcitationGaussian1 method) (bfdtd.excitationTemplate.ExcitationGaussian2 method) (bfdtd.excitationTemplate.ExcitationUniform method) writeDatFiles() (bfdtd.BFDTDobject.BFDTDobject method) writeExcitationsToFile() (bfdtd.BFDTDobject.BFDTDobject method) writeFileList() (bfdtd.BFDTDobject.BFDTDobject method) writeFromParsedOptions() (crystals.RCD_CubicLattice.RCD_GWL_Cylinder method) (GWL.SpiralPhasePlate.SpiralPhasePlate method) (crystals.RCD_CubicLattice.RCD_GWL_Parallelepiped method) writeGeoFile() (bfdtd.BFDTDobject.BFDTDobject method) writeGWL() (GWL.GWL_parser.GWLobject method) (GWL.SpiralSphere.SpiralSphere method) (GWL.parallelepiped.Parallelepiped method) (GWL.tilted_grating.TiltedGrating method) (GWL.tube.TruncatedTube method) (GWL.tube.Tube method) (GWL.tube.TubePapa method) (GWL.woodpile.Woodpile method) writeGWLWithPowerCompensation() (GWL.GWL_parser.GWLobject method) writeHDF5() (bfdtd.BFDTDobject.BFDTDobject method) writeInpFile() (bfdtd.BFDTDobject.BFDTDobject method) (in module bin.bfdtd_tool) writeMesh() (bfdtd.meshobject.MeshObject method) writePrnFile() (in module utilities.prnutils) writeProbesToFile() (bfdtd.BFDTDobject.BFDTDobject method) writeRotations() (bfdtd.GeometryObjects.GeometryObject method) writeShellScript() (bfdtd.BFDTDobject.BFDTDobject method) writeTorqueJobDirectory() (bfdtd.BFDTDobject.BFDTDobject method)

X

xmesh (meshing.meshing.Mesh3D attribute)

Y

ymesh (meshing.meshing.Mesh3D attribute)

Z

zmesh (meshing.meshing.Mesh3D attribute)